| Platz | Mannschaft | Pkt. | Gelbe Karten | Gelb-Rote Karten | Rote Karten |
|---|---|---|---|---|---|
| 1 | SpVgg Greuther Fürth | 55 | 47 | 1 | 1 |
| 2 | SC Freiburg | 60 | 60 | 0 | 0 |
| 3 | Karlsruher SC | 61 | 53 | 1 | 1 |
| 4 | Eintracht Braunschweig | 64 | 58 | 2 | 0 |
| 5 | SpVgg Unterhaching | 68 | 59 | 3 | 0 |
| 6 | VfL Bochum | 71 | 60 | 2 | 1 |
| 7 | SC Paderborn 07 | 77 | 59 | 1 | 3 |
| 8 | Sportfreunde Siegen | 79 | 68 | 2 | 1 |
| 8 | Hansa Rostock | 79 | 73 | 2 | 0 |
| 10 | Erzgebirge Aue | 82 | 59 | 1 | 4 |
| 10 | Dynamo Dresden | 82 | 57 | 5 | 2 |
| 12 | TSV 1860 München | 83 | 78 | 0 | 1 |
| 13 | 1. FC Saarbrücken | 84 | 64 | 5 | 1 |
| 14 | Kickers Offenbach | 87 | 65 | 4 | 2 |
| 15 | SV Wacker Burghausen | 92 | 83 | 3 | 0 |
| 16 | Rot Weiss Ahlen | 93 | 80 | 1 | 2 |
| 17 | Energie Cottbus | 95 | 80 | 5 | 0 |
| 18 | Alemannia Aachen | 96 | 80 | 2 | 2 |