| Platz | Mannschaft | Pkt. | Gelbe Karten | Gelb-Rote Karten | Rote Karten |
|---|---|---|---|---|---|
| 1 | 1. FC Heidenheim | 57 | 46 | 2 | 1 |
| 2 | Hamburger SV | 65 | 49 | 2 | 2 |
| 2 | SV Darmstadt 98 | 65 | 62 | 1 | 0 |
| 4 | SV Sandhausen | 68 | 65 | 1 | 0 |
| 5 | 1. FC Magdeburg | 71 | 68 | 1 | 0 |
| 6 | Holstein Kiel | 72 | 55 | 4 | 1 |
| 7 | Arminia Bielefeld | 74 | 64 | 0 | 2 |
| 7 | FC St. Pauli | 74 | 65 | 3 | 0 |
| 9 | Dynamo Dresden | 78 | 70 | 1 | 1 |
| 10 | VfL Bochum | 79 | 58 | 2 | 3 |
| 11 | 1. FC Union Berlin | 81 | 70 | 2 | 1 |
| 12 | SC Paderborn 07 | 82 | 71 | 2 | 1 |
| 13 | 1. FC Köln | 85 | 71 | 3 | 1 |
| 14 | Jahn Regensburg | 87 | 76 | 2 | 1 |
| 15 | FC Ingolstadt | 97 | 72 | 5 | 2 |
| 15 | Erzgebirge Aue | 97 | 86 | 2 | 1 |
| 17 | SpVgg Greuther Fürth | 98 | 77 | 2 | 3 |
| 18 | MSV Duisburg | 102 | 89 | 1 | 2 |