| Platz | Mannschaft | Pkt. | Gelbe Karten | Gelb-Rote Karten | Rote Karten |
|---|---|---|---|---|---|
| 1 | VfL Osnabrück | 71 | 71 | 0 | 0 |
| 2 | Energie Cottbus | 75 | 66 | 3 | 0 |
| 3 | Hansa Rostock | 77 | 67 | 0 | 2 |
| 4 | MSV Duisburg | 80 | 72 | 1 | 1 |
| 5 | TSV 1860 München | 84 | 72 | 4 | 0 |
| 6 | FC Ingolstadt | 85 | 72 | 1 | 2 |
| 6 | SC Verl | 85 | 72 | 1 | 2 |
| 8 | SSV Ulm 1846 Fussball | 86 | 86 | 0 | 0 |
| 9 | FC Viktoria Köln | 87 | 79 | 1 | 1 |
| 10 | SV Wehen Wiesbaden | 90 | 85 | 0 | 1 |
| 10 | TSG Hoffenheim II | 90 | 74 | 2 | 2 |
| 12 | Rot-Weiss Essen | 91 | 76 | 0 | 3 |
| 12 | TSV Havelse | 91 | 77 | 3 | 1 |
| 14 | 1. FC Saarbrücken | 93 | 80 | 1 | 2 |
| 15 | VfB Stuttgart II | 94 | 85 | 3 | 0 |
| 16 | Erzgebirge Aue | 99 | 84 | 0 | 3 |
| 17 | SV Waldhof Mannheim | 104 | 79 | 5 | 2 |
| 18 | 1. FC Schweinfurt 05 | 110 | 96 | 3 | 1 |
| 19 | Alemannia Aachen | 115 | 94 | 2 | 3 |
| 20 | Jahn Regensburg | 120 | 95 | 0 | 5 |