| Rank | Team | Pts. | Yellow cards | Second yellow cards | Straight red cards |
|---|---|---|---|---|---|
| 1 | Karlsruher SC | 49 | 46 | 1 | 0 |
| 1 | VfB Stuttgart | 49 | 36 | 1 | 2 |
| 3 | TSV 1860 Munich | 50 | 40 | 0 | 2 |
| 4 | 1. FC Heidenheim | 54 | 49 | 0 | 1 |
| 5 | TSG Hoffenheim | 57 | 48 | 3 | 0 |
| 6 | 1. FC Nuremberg | 58 | 50 | 1 | 1 |
| 7 | SV Sandhausen | 61 | 53 | 1 | 1 |
| 8 | 1. FSV Mainz 05 | 66 | 51 | 0 | 3 |
| 8 | Bayern Munich | 66 | 50 | 2 | 2 |
| 10 | Eintracht Frankfurt | 69 | 45 | 3 | 3 |
| 11 | 1. FC Kaiserslautern | 74 | 66 | 1 | 1 |
| 12 | FC Augsburg | 76 | 58 | 1 | 3 |
| 13 | SpVgg Greuther Furth | 77 | 54 | 1 | 4 |
| 13 | FC Ingolstadt | 77 | 59 | 1 | 3 |