| Rank | Team | Pts. | Yellow cards | Second yellow cards | Straight red cards |
|---|---|---|---|---|---|
| 1 | SC Freiburg | 39 | 34 | 0 | 1 |
| 2 | TSV 1860 Munich | 44 | 44 | 0 | 0 |
| 3 | FC Augsburg | 46 | 38 | 1 | 1 |
| 4 | 1. FC Heidenheim | 49 | 38 | 2 | 1 |
| 5 | Karlsruher SC | 50 | 42 | 1 | 1 |
| 5 | FC Ingolstadt | 50 | 47 | 1 | 0 |
| 7 | 1. FC Nuremberg | 52 | 41 | 2 | 1 |
| 7 | Eintracht Frankfurt | 52 | 47 | 0 | 1 |
| 9 | 1. FC Kaiserslautern | 55 | 47 | 1 | 1 |
| 9 | TSG Hoffenheim | 55 | 49 | 2 | 0 |
| 11 | VfB Stuttgart | 57 | 46 | 2 | 1 |
| 11 | Jahn Regensburg | 57 | 49 | 1 | 1 |
| 11 | Bayern Munich | 57 | 37 | 0 | 4 |
| 14 | 1. FSV Mainz 05 | 60 | 47 | 1 | 2 |