| Place | Player | Team | Goals | Penalties |
|---|---|---|---|---|
| 1. | Jurgen Rische | VfB Leipzig | 17 | 0 |
| 2. | Torsten Gutschow | Hannover 96 | 16 | 0 |
| 3. | Rainer Rauffmann | SV Meppen | 15 | 0 |
| 3. | Stefan Beinlich | Hansa Rostock | 15 | 0 |
| 5. | Jan Sievers | SV Meppen | 14 | 0 |
| 5. | Thomas Ziemer | 1. FSV Mainz 05 | 14 | 0 |
| 7. | Joe Max Moore | 1. FC Saarbrücken | 13 | 0 |
| 8. | Jens Scharping | FC St. Pauli | 12 | 0 |
| 8. | Jorg Kirsten | Waldhof Mannheim | 12 | 0 |
| 8. | Miklos Molnar | FSV Frankfurt | 12 | 0 |
| 11. | Mikkel Beck | Fortuna Köln | 11 | 0 |
| 11. | Siegfried Reich | VfL Wolfsburg | 11 | 0 |
| 11. | Andrzej Kobylanski | Hannover 96 | 11 | 0 |
| 11. | Mike Lunsmann | Hertha BSC | 11 | 0 |
| 15. | Michael Preetz | SG Wattenscheid 09 | 10 | 0 |
| 15. | Juri Sawitschew | FC St. Pauli | 10 | 0 |
| 15. | Steffen Baumgart | Hansa Rostock | 10 | 0 |
| 15. | Carsten Wolters | SG Wattenscheid 09 | 10 | 0 |
| 15. | Vlatko Glavas | Fortuna Düsseldorf | 10 | 0 |
| 20. | Fabrizio Hayer | Waldhof Mannheim | 9 | 0 |
| 20. | Silvio Meissner | Chemnitzer FC | 9 | 0 |
| 20. | Rocco Milde | Hansa Rostock | 9 | 0 |
| 23. | Stefan Meissner | VfL Wolfsburg | 8 | 0 |
| 23. | Arnar Gunnlaugsson | 1. FC Nürnberg | 8 | 0 |
| 23. | Ralf Voigt | Fortuna Düsseldorf | 8 | 0 |
| 23. | Steffen Heidrich | VfB Leipzig | 8 | 0 |
| 27. | Andre Golke | 1. FC Nürnberg | 7 | 0 |
| 27. | Marek Lesniak | SG Wattenscheid 09 | 7 | 0 |
| 27. | Kujtim Shala | Chemnitzer FC | 7 | 0 |
| 27. | Jurgen Klopp | 1. FSV Mainz 05 | 7 | 0 |
| 27. | Charles Akonnor | Fortuna Köln | 7 | 0 |
| 27. | Lars Hermel | FSV Zwickau | 7 | 0 |
| 27. | Stefan Simon | FC 08 Homburg | 7 | 0 |
| 27. | Dirk Lottner | Fortuna Köln | 7 | 0 |
| 27. | Martin Driller | FC St. Pauli | 7 | 0 |
| 36. | Timo Lange | Hansa Rostock | 6 | 0 |
| 36. | Jacek Mencel | Hansa Rostock | 6 | 0 |
| 36. | Sead Kapetanovic | FSV Frankfurt | 6 | 0 |
| 36. | Jacob Svinggaard | Fortuna Köln | 6 | 0 |
| 36. | Bernd Tipold | FSV Zwickau | 6 | 0 |
| 36. | Thomas Stickroth | 1. FC Saarbrücken | 6 | 0 |
| 36. | Ryszard Cyron | Fortuna Düsseldorf | 6 | 0 |
| 36. | Gabriel Bertalan | FSV Zwickau | 6 | 0 |
| 36. | Marco Grevelhorster | FSV Frankfurt | 6 | 0 |
| 36. | Dariusz Szubert | FC St. Pauli | 6 | 0 |
| 36. | Rene Schneider | Hansa Rostock | 6 | 0 |
| 47. | Falko Gotz | 1. FC Saarbrücken | 5 | 0 |
| 47. | Robert Thoben | SV Meppen | 5 | 0 |
| 47. | Daniel Barwolf | VfB Leipzig | 5 | 0 |
| 47. | Sixten Veit | Chemnitzer FC | 5 | 0 |