| Rank | Team | Pts. | Yellow cards | Second yellow cards | Straight red cards |
|---|---|---|---|---|---|
| 1 | VfB Lubeck | 62 | 52 | 0 | 2 |
| 2 | SpVgg Unterhaching | 76 | 65 | 2 | 1 |
| 3 | 1. FC Kaiserslautern | 81 | 76 | 0 | 1 |
| 4 | FSV Zwickau | 82 | 61 | 2 | 3 |
| 5 | Hertha BSC | 85 | 66 | 3 | 2 |
| 5 | 1. FSV Mainz 05 | 85 | 77 | 1 | 1 |
| 7 | Rot-Weiss Essen | 91 | 74 | 4 | 1 |
| 8 | SV Meppen | 95 | 89 | 2 | 0 |
| 9 | Eintracht Frankfurt | 97 | 70 | 4 | 3 |
| 10 | Fortuna Köln | 98 | 87 | 2 | 1 |
| 11 | FC Gütersloh | 99 | 74 | 5 | 2 |
| 12 | KFC Uerdingen | 101 | 71 | 5 | 3 |
| 13 | Waldhof Mannheim | 104 | 77 | 4 | 3 |
| 14 | FC Carl Zeiss Jena | 105 | 77 | 6 | 2 |
| 15 | VfB Oldenburg | 109 | 90 | 3 | 2 |
| 15 | VfB Leipzig | 109 | 81 | 6 | 2 |
| 17 | Stuttgarter Kickers | 114 | 80 | 8 | 2 |
| 18 | VfL Wolfsburg | 115 | 95 | 5 | 1 |