| Rank | Team | Pts. | Yellow cards | Second yellow cards | Straight red cards |
|---|---|---|---|---|---|
| 1 | SC Freiburg | 58 | 55 | 1 | 0 |
| 2 | 1. FSV Mainz 05 | 62 | 51 | 2 | 1 |
| 2 | Hansa Rostock | 62 | 49 | 1 | 2 |
| 4 | Rot-Weiß Oberhausen | 66 | 63 | 1 | 0 |
| 5 | FSV Frankfurt | 69 | 58 | 2 | 1 |
| 6 | VfL Osnabrück | 74 | 63 | 2 | 1 |
| 7 | FC Augsburg | 77 | 77 | 0 | 0 |
| 8 | 1. FC Nürnberg | 78 | 58 | 0 | 4 |
| 9 | TSV 1860 München | 80 | 72 | 1 | 1 |
| 10 | Rot Weiss Ahlen | 83 | 78 | 0 | 1 |
| 11 | TuS Koblenz | 84 | 67 | 4 | 1 |
| 12 | Alemannia Aachen | 88 | 60 | 1 | 5 |
| 12 | SpVgg Greuther Fürth | 88 | 64 | 3 | 3 |
| 14 | MSV Duisburg | 90 | 77 | 1 | 2 |
| 15 | 1. FC Kaiserslautern | 91 | 77 | 3 | 1 |
| 16 | FC St. Pauli | 96 | 71 | 5 | 2 |
| 17 | FC Ingolstadt | 97 | 82 | 0 | 3 |
| 18 | SV Wehen Wiesbaden | 100 | 82 | 1 | 3 |