| Rank | Team | Pts. | Yellow cards | Second yellow cards | Straight red cards |
|---|---|---|---|---|---|
| 1 | Bayern Munich | 56 | 43 | 1 | 2 |
| 2 | FC Ingolstadt | 58 | 50 | 1 | 1 |
| 3 | FV Illertissen | 64 | 56 | 1 | 1 |
| 4 | 1. FC Nuremberg | 66 | 53 | 1 | 2 |
| 4 | FC Memmingen | 66 | 61 | 0 | 1 |
| 6 | SV Schalding-Heining | 70 | 62 | 1 | 1 |
| 7 | SV Seligenporten | 72 | 50 | 4 | 2 |
| 8 | TSV 1860 Munich | 73 | 45 | 1 | 5 |
| 9 | TSV Buchbach | 75 | 72 | 1 | 0 |
| 10 | SpVgg Greuther Furth | 77 | 61 | 2 | 2 |
| 11 | FC Augsburg | 79 | 56 | 1 | 4 |
| 12 | TSV 1896 Rain | 82 | 66 | 2 | 2 |
| 13 | 1. FC Schweinfurt 05 | 85 | 82 | 1 | 0 |
| 14 | SpVgg Bayern Hof | 90 | 75 | 0 | 3 |
| 15 | Eintracht Bamberg | 91 | 80 | 2 | 1 |
| 15 | TSV 1860 Rosenheim | 91 | 77 | 3 | 1 |
| 17 | Viktoria Aschaffenburg | 94 | 84 | 0 | 2 |
| 18 | SV Heimstetten | 97 | 74 | 1 | 4 |
| 19 | Würzburger Kickers | 98 | 77 | 2 | 3 |