| Rank | Team | Pts. | Yellow cards | Second yellow cards | Straight red cards |
|---|---|---|---|---|---|
| 1 | Fortuna Düsseldorf | 71 | 59 | 4 | 0 |
| 2 | Eintracht Braunschweig | 72 | 69 | 1 | 0 |
| 3 | KFC Uerdingen | 73 | 60 | 1 | 2 |
| 4 | Holstein Kiel | 75 | 61 | 3 | 1 |
| 4 | Werder Bremen | 75 | 70 | 0 | 1 |
| 6 | VfB Lubeck | 76 | 59 | 4 | 1 |
| 7 | Borussia Dortmund II | 79 | 55 | 3 | 3 |
| 8 | FC St. Pauli | 83 | 77 | 2 | 0 |
| 9 | 1. FC Cologne | 84 | 59 | 5 | 2 |
| 10 | Arminia Bielefeld | 86 | 72 | 3 | 1 |
| 11 | Wuppertaler SV | 87 | 66 | 2 | 3 |
| 12 | 1. FC Union Berlin | 91 | 77 | 3 | 1 |
| 13 | Chemnitzer FC | 92 | 59 | 1 | 6 |
| 14 | Preußen Münster | 93 | 75 | 1 | 3 |
| 15 | Hertha BSC II | 96 | 67 | 3 | 4 |
| 16 | VfL Osnabrück | 101 | 84 | 4 | 1 |
| 17 | Hamburger SV II | 106 | 79 | 4 | 3 |
| 18 | VfL Wolfsburg | 107 | 76 | 7 | 2 |
| 19 | SC Paderborn 07 | 114 | 84 | 5 | 3 |