| Rank | Team | Pts. | Yellow cards | Second yellow cards | Straight red cards |
|---|---|---|---|---|---|
| 1 | 1. FSV Mainz 05 | 43 | 37 | 2 | 0 |
| 1 | Jahn Regensburg | 43 | 34 | 3 | 0 |
| 3 | Bayern Munich | 47 | 39 | 1 | 1 |
| 3 | TSV 1860 Munich | 47 | 31 | 2 | 2 |
| 5 | VfB Stuttgart | 49 | 33 | 2 | 2 |
| 5 | SpVgg Greuther Furth | 49 | 46 | 1 | 0 |
| 7 | 1. FC Kaiserslautern | 50 | 41 | 3 | 0 |
| 7 | SV Darmstadt 98 | 50 | 38 | 4 | 0 |
| 9 | Waldhof Mannheim | 51 | 40 | 2 | 1 |
| 10 | SC Freiburg | 56 | 39 | 4 | 1 |
| 11 | Karlsruher SC | 57 | 32 | 0 | 5 |
| 12 | TSG Hoffenheim | 63 | 58 | 0 | 1 |
| 13 | Eintracht Frankfurt | 66 | 46 | 0 | 4 |
| 14 | 1. FC Nuremberg | 69 | 49 | 0 | 4 |