| Place | Player | Matches | Goals | Penalties | First match | Last match |
|---|---|---|---|---|---|---|
| 1 | Piotr Trochowski | 19 | 6 | 0 | 2001-11-08 | 2003-05-23 |
| 1 | Mario Gomez | 19 | 11 | 0 | 2003-02-18 | 2004-07-18 |
| 3 | Manuel Fischer | 18 | 7 | 0 | 2006-09-05 | 2008-05-27 |
| 3 | Dennis Diekmeier | 18 | 4 | 0 | 2007-09-07 | 2008-07-26 |
| 3 | Marc-Oliver Kempf | 18 | 0 | 0 | 2013-08-14 | 2014-07-31 |
| 3 | Kevin Akpoguma | 18 | 0 | 0 | 2013-05-30 | 2014-07-31 |
| 7 | Arne Feick | 17 | 0 | 0 | 2006-09-05 | 2007-07-24 |
| 7 | Jerome Boateng | 17 | 2 | 1 | 2005-09-12 | 2007-07-24 |
| 7 | Max Kruse | 17 | 6 | 0 | 2006-09-05 | 2007-07-24 |
| 7 | Fabian Holthaus | 17 | 1 | 0 | 2013-09-06 | 2014-07-31 |
| 11 | Sebastian Tyrala | 16 | 5 | 0 | 2006-09-05 | 2007-07-24 |
| 11 | Benedikt Howedes | 16 | 0 | 0 | 2006-09-05 | 2007-07-24 |
| 11 | Florian Jungwirth | 16 | 0 | 0 | 2007-09-07 | 2008-07-26 |
| 11 | Hany Mukhtar | 16 | 9 | 1 | 2013-08-14 | 2014-07-31 |
| 15 | Deniz Naki | 15 | 9 | 1 | 2007-09-07 | 2008-07-26 |
| 15 | Bjorn Kopplin | 15 | 0 | 0 | 2007-09-07 | 2008-07-26 |
| 15 | Davie Selke | 15 | 14 | 0 | 2013-08-14 | 2014-07-31 |
| 15 | Gokhan Gul | 15 | 3 | 1 | 2016-07-14 | 2017-07-09 |
| 15 | Paris Brunner | 15 | 5 | 2 | 2024-09-07 | 2025-06-23 |
| 15 | Said El Mala | 15 | 7 | 0 | 2024-09-07 | 2025-06-23 |
| 21 | Abdenour Amachaibou | 14 | 5 | 1 | 2005-09-12 | 2006-05-30 |
| 21 | Robert Muller | 14 | 1 | 0 | 2004-09-17 | 2005-07-26 |
| 21 | Danny Latza | 14 | 0 | 0 | 2007-09-11 | 2008-07-26 |
| 21 | Eugen Polanski | 14 | 4 | 1 | 2004-09-15 | 2005-07-26 |
| 21 | Manuel Konrad | 14 | 0 | 0 | 2006-09-05 | 2007-07-24 |
| 21 | Timo Gebhart | 14 | 7 | 3 | 2007-09-07 | 2008-07-26 |
| 21 | Anthony Syhre | 14 | 1 | 0 | 2013-08-14 | 2014-07-31 |
| 21 | Niklas Stark | 14 | 3 | 0 | 2013-08-14 | 2014-07-31 |
| 21 | Timo Werner | 14 | 10 | 2 | 2013-05-30 | 2015-07-13 |
| 21 | Julian Brandt | 14 | 2 | 0 | 2013-08-14 | 2014-07-31 |
| 21 | Almugera Kabar | 14 | 1 | 0 | 2024-09-07 | 2025-06-23 |
| 32 | Daniel Haas | 13 | 0 | 0 | 2001-09-04 | 2002-07-28 |
| 32 | Mike Hanke | 13 | 7 | 0 | 2001-09-04 | 2002-07-28 |
| 32 | Daniyel Cimen | 13 | 1 | 1 | 2003-03-11 | 2004-05-19 |
| 32 | Timo Kunert | 13 | 2 | 0 | 2005-09-12 | 2006-05-30 |
| 32 | Shervin Radjabali-Fardi | 13 | 0 | 0 | 2008-09-04 | 2010-05-20 |
| 32 | Kevin-Prince Boateng | 13 | 7 | 0 | 2005-02-23 | 2006-05-30 |
| 32 | Benjamin Wingerter | 13 | 0 | 0 | 2001-09-04 | 2002-07-28 |
| 32 | Reinhold Yabo | 13 | 1 | 0 | 2010-08-18 | 2011-06-05 |
| 32 | Shawn Parker | 13 | 5 | 0 | 2011-05-31 | 2012-05-27 |
| 32 | Antonio Rudiger | 13 | 0 | 0 | 2011-05-31 | 2012-05-30 |
| 32 | Yannick Gerhardt | 13 | 1 | 0 | 2012-08-14 | 2013-06-10 |
| 32 | Thomas Pledl | 13 | 3 | 2 | 2012-08-14 | 2013-06-10 |
| 32 | Robin Yalcin | 13 | 0 | 0 | 2012-08-14 | 2013-06-10 |
| 32 | Max Christiansen | 13 | 3 | 0 | 2014-09-05 | 2015-07-13 |
| 32 | Nadiem Amiri | 13 | 3 | 1 | 2014-09-05 | 2015-07-13 |
| 32 | Benedikt Gimber | 13 | 0 | 0 | 2015-09-04 | 2016-07-21 |
| 32 | Max Moerstedt | 13 | 6 | 0 | 2024-09-07 | 2025-06-23 |
| 49 | Pascal Bieler | 12 | 0 | 0 | 2004-09-15 | 2005-07-26 |
| 49 | Ioannis Masmanidis | 12 | 5 | 1 | 2001-11-08 | 2002-07-28 |