| Place | Player | Team | Goals | Penalties |
|---|---|---|---|---|
| 1. | Siegfried Reich | VfL Wolfsburg | 27 | 0 |
| 2. | Theo Gries | Hertha BSC | 23 | 0 |
| 3. | Holger Aden | Eintracht Braunschweig | 19 | 0 |
| 3. | Radek Drulak | VfB Oldenburg | 19 | 0 |
| 5. | Michael Hubner | FC 08 Homburg | 18 | 0 |
| 6. | Michael Tonnies | Wuppertaler SV | 17 | 0 |
| 6. | Jonathan Akpoborie | FC Carl Zeiss Jena | 17 | 0 |
| 6. | Michael Preetz | MSV Duisburg | 17 | 0 |
| 6. | Steffen Heidrich | Chemnitzer FC | 17 | 0 |
| 10. | Altin Rraklli | SC Freiburg | 16 | 0 |
| 11. | Bernd Hobsch | VfB Leipzig | 15 | 0 |
| 11. | Martin Braun | SC Freiburg | 15 | 0 |
| 13. | Gerrit Meinke | VfL Osnabrück | 14 | 0 |
| 13. | Thomas Epp | Stuttgarter Kickers | 14 | 0 |
| 15. | Carsten Propper | FC Remscheid | 13 | 0 |
| 15. | Rene Deffke | Fortuna Köln | 13 | 0 |
| 17. | Mike Lunsmann | Hertha BSC | 12 | 0 |
| 17. | Claus-Dieter Wollitz | VfL Osnabrück | 12 | 0 |
| 17. | Dirk Anders | VfB Leipzig | 12 | 0 |
| 17. | Mario Basler | Hertha BSC | 12 | 0 |
| 21. | Helmut Lemberger | SpVgg Unterhaching | 11 | 0 |
| 21. | Jens Todt | SC Freiburg | 11 | 0 |
| 21. | Uwe Spies | SC Freiburg | 11 | 0 |
| 21. | Sven Demandt | Hertha BSC | 11 | 0 |
| 21. | Jacek Frackiewicz | VfL Wolfsburg | 11 | 0 |
| 26. | Leonardo Manzi | FC St. Pauli | 10 | 0 |
| 26. | Dirk Lottner | Fortuna Köln | 10 | 0 |
| 26. | Jorg Kirsten | Waldhof Mannheim | 10 | 0 |
| 26. | David Wagner | 1. FSV Mainz 05 | 10 | 0 |
| 26. | Fredi Bobic | Stuttgarter Kickers | 10 | 0 |
| 26. | Thomas Seeliger | SC Freiburg | 10 | 0 |
| 26. | Kujtim Shala | Stuttgarter Kickers | 10 | 0 |
| 26. | Jurgen Rische | VfB Leipzig | 10 | 0 |
| 26. | Stefan Simon | SV Darmstadt 98 | 10 | 0 |
| 35. | Ryszard Cyron | Fortuna Düsseldorf | 9 | 0 |
| 35. | Thorsten Boer | Chemnitzer FC | 9 | 0 |
| 35. | Alexander Lobe | SpVgg Unterhaching | 9 | 0 |
| 35. | Olaf Schreiber | FC Carl Zeiss Jena | 9 | 0 |
| 35. | Paolo da Palma | VfL Osnabrück | 9 | 0 |
| 35. | Heiko Marz | Hansa Rostock | 9 | 0 |
| 35. | Thomas Gerstner | VfB Oldenburg | 9 | 0 |
| 42. | Carsten Linke | VfB Oldenburg | 8 | 0 |
| 42. | Andre Sirocks | Hannover 96 | 8 | 0 |
| 42. | Sergio Maciel | FC 08 Homburg | 8 | 0 |
| 42. | Fabrizio Hayer | 1. FSV Mainz 05 | 8 | 0 |
| 42. | Andreas Zeyer | SC Freiburg | 8 | 0 |
| 42. | Norbert Nachtweih | Waldhof Mannheim | 8 | 0 |
| 42. | Bernd Buchheister | Eintracht Braunschweig | 8 | 0 |
| 42. | Alfonso Garcia | SpVgg Unterhaching | 8 | 0 |
| 42. | Heiko Weber | FC Carl Zeiss Jena | 8 | 0 |