| Place | Player | Team | Goals | Penalties |
|---|---|---|---|---|
| 1. | Andrij Woronin | 1. FSV Mainz 05 | 20 | 4 |
| 2. | Josef Ivanovic | Alemannia Aachen | 18 | 1 |
| 2. | Matthias Scherz | 1. FC Köln | 18 | 0 |
| 2. | Nico Frommer | SSV Reutlingen | 18 | 3 |
| 5. | Zlatan Bajramovic | SC Freiburg | 15 | 0 |
| 5. | Marius Ebbers | MSV Duisburg | 15 | 0 |
| 7. | Najeh Braham | Eintracht Trier | 13 | 0 |
| 7. | Dirk Lottner | 1. FC Köln | 13 | 3 |
| 7. | Sascha Rosler | SpVgg Greuther Fürth | 13 | 0 |
| 10. | Bruno Labbadia | Karlsruher SC | 12 | 0 |
| 11. | Daniel Barwolf | VfB Lubeck | 11 | 2 |
| 11. | Cyrille Bella | Rot Weiss Ahlen | 11 | 0 |
| 11. | Dimtscho Belijakow | Rot-Weiß Oberhausen | 11 | 0 |
| 14. | Gernot Plassnegger | Waldhof Mannheim | 10 | 0 |
| 14. | Ervin Skela | Eintracht Frankfurt | 10 | 2 |
| 14. | Lewan Kobiaschwili | SC Freiburg | 10 | 9 |
| 14. | Benjamin Auer | 1. FSV Mainz 05 | 10 | 0 |
| 18. | Steffen Baumgart | 1. FC Union Berlin | 9 | 0 |
| 18. | Fabian Gerber | SC Freiburg | 9 | 0 |
| 18. | Soumaila Coulibaly | SC Freiburg | 9 | 0 |
| 18. | Mac Younga-Mouhani | Wacker Burghausen | 9 | 0 |
| 18. | Rolf-Christel Guie-Mien | SC Freiburg | 9 | 0 |
| 23. | Sasa Radulovic | Rot-Weiß Oberhausen | 8 | 1 |
| 23. | Nico Patschinski | FC St. Pauli | 8 | 1 |
| 23. | Musemestre Bamba | Rot Weiss Ahlen | 8 | 2 |
| 23. | Sambo Choji | Eintracht Braunschweig | 8 | 0 |
| 23. | Michael Thurk | 1. FSV Mainz 05 | 8 | 0 |
| 28. | Florian Kringe | 1. FC Köln | 7 | 0 |
| 28. | Jens Scharping | VfB Lubeck | 7 | 0 |
| 28. | Antun Labak | Eintracht Trier | 7 | 1 |
| 28. | Marcus Feinbier | Rot Weiss Ahlen | 7 | 0 |
| 28. | Alexander Meier | FC St. Pauli | 7 | 0 |
| 28. | Danny Winkler | Eintracht Trier | 7 | 1 |
| 34. | Jurgen Rische | Eintracht Braunschweig | 6 | 0 |
| 34. | Ferydoon Zandi | VfB Lubeck | 6 | 0 |
| 34. | Gustav Policella | SpVgg Greuther Fürth | 6 | 0 |
| 34. | Christian Springer | 1. FC Köln | 6 | 0 |
| 34. | Iwan Sajenko | Karlsruher SC | 6 | 0 |
| 34. | Miroslaw Spizak | Alemannia Aachen | 6 | 0 |
| 34. | Petr Ruman | SpVgg Greuther Fürth | 6 | 0 |
| 34. | Markus Beierle | Eintracht Frankfurt | 6 | 0 |
| 34. | Jermaine Jones | Eintracht Frankfurt | 6 | 0 |
| 34. | Emmanuel Krontiris | Alemannia Aachen | 6 | 0 |
| 34. | Enrico Kern | Waldhof Mannheim | 6 | 0 |
| 34. | Kostadin Widolow | 1. FC Union Berlin | 6 | 1 |
| 46. | Olivier Caillas | SpVgg Greuther Fürth | 5 | 0 |
| 46. | Christof Babatz | 1. FSV Mainz 05 | 5 | 0 |
| 46. | Aydin Cetin | Karlsruher SC | 5 | 0 |
| 46. | Sreto Ristic | 1. FC Union Berlin | 5 | 0 |
| 46. | Patrick Wurll | SSV Reutlingen | 5 | 0 |