| Place | Player | Team | Goals | Penalties |
|---|---|---|---|---|
| 1. | Fabian Klos | Arminia Bielefeld | 23 | 0 |
| 2. | Justin Eilers | Dynamo Dresden | 19 | 2 |
| 3. | Zlatko Janjic | MSV Duisburg | 17 | 5 |
| 3. | Anton Fink | Chemnitzer FC | 17 | 3 |
| 5. | Marcel Ziemer | Hansa Rostock | 15 | 1 |
| 6. | Kingsley Onuegbu | MSV Duisburg | 14 | 0 |
| 6. | Stanislav Iljutcenko | VfL Osnabrück | 14 | 0 |
| 8. | Tammo Harder | Borussia Dortmund II | 13 | 1 |
| 8. | Addy Menga | VfL Osnabrück | 13 | 0 |
| 8. | Tim Kleindienst | Energie Cottbus | 13 | 0 |
| 11. | Timo Furuholm | Hallescher FC | 12 | 0 |
| 11. | Marc Heider | Holstein Kiel | 12 | 0 |
| 13. | Marcel Reichwein | Preußen Münster | 11 | 1 |
| 13. | Rafael Kazior | Holstein Kiel | 11 | 2 |
| 13. | Akaki Gogia | Hallescher FC | 11 | 2 |
| 13. | Pascal Kopke | SpVgg Unterhaching | 11 | 0 |
| 13. | Aias Aosman | Jahn Regensburg | 11 | 2 |
| 13. | Johannes Rahn | Fortuna Köln | 11 | 1 |
| 19. | Manuel Schaffler | Holstein Kiel | 10 | 0 |
| 19. | Michele Rizzi | SG Sonnenhof Grossaspach | 10 | 4 |
| 19. | Carsten Kammlott | Rot-Weiß Erfurt | 10 | 1 |
| 19. | Amaury Bischoff | Preußen Münster | 10 | 4 |
| 19. | Christian Muller | Arminia Bielefeld | 10 | 0 |
| 19. | Jose Vunguidica | SV Wehen Wiesbaden | 10 | 0 |
| 19. | Lucas Holer | 1. FSV Mainz 05 | 10 | 0 |
| 26. | Tobias Janicke | SV Wehen Wiesbaden | 9 | 0 |
| 26. | Dominik Widemann | SpVgg Unterhaching | 9 | 0 |
| 28. | Kevin Mohwald | Rot-Weiß Erfurt | 8 | 0 |
| 28. | Sven Michel | Energie Cottbus | 8 | 0 |
| 28. | Christoph Hemlein | Arminia Bielefeld | 8 | 0 |
| 28. | Uwe Mohrle | Energie Cottbus | 8 | 0 |
| 28. | Rogier Krohne | Preußen Münster | 8 | 1 |
| 28. | Rafael Czichos | Rot-Weiß Erfurt | 8 | 2 |
| 34. | Enzo Marchese | Stuttgarter Kickers | 7 | 6 |
| 34. | Soufian Benyamina | SV Wehen Wiesbaden | 7 | 0 |
| 34. | Christian Bickel | Hansa Rostock | 7 | 0 |
| 34. | David Ulm | Arminia Bielefeld | 7 | 3 |
| 34. | Mehmet Kara | Preußen Münster | 7 | 0 |
| 34. | Osayamen Osawe | Hallescher FC | 7 | 0 |
| 34. | Philip Turpitz | Chemnitzer FC | 7 | 0 |
| 34. | Marc Stein | Stuttgarter Kickers | 7 | 1 |
| 42. | Dennis Grote | MSV Duisburg | 6 | 0 |
| 42. | Marcus Piossek | Preußen Münster | 6 | 0 |
| 42. | Marco Gruttner | VfB Stuttgart | 6 | 0 |
| 42. | Marco Konigs | SV Wehen Wiesbaden | 6 | 0 |
| 42. | Sylvano Comvalius | Dynamo Dresden | 6 | 0 |
| 42. | Patrick Breitkreuz | Holstein Kiel | 6 | 0 |
| 42. | Sahr Senesie | SG Sonnenhof Grossaspach | 6 | 0 |
| 42. | David Blacha | SV Wehen Wiesbaden | 6 | 0 |
| 42. | Halil Savran | Hansa Rostock | 6 | 0 |